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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIUR3_33433-P1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 429aa MW: 48203.9 Da PI: 4.9187 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.8 | 2.2e-12 | 264 | 310 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+ WT+eE++ ++ + + +G g+Wk I++++ +++t+ q+ s+ qk+ TRIUR3_33433-P1 264 RKFWTKEEHKSFLYGLEVYGRGDWKNISKHFVTTKTPVQVSSHAQKF 310 678******************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.412 | 259 | 315 | IPR017930 | Myb domain |
TIGRFAMs | TIGR01557 | 3.0E-13 | 263 | 313 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 3.88E-16 | 263 | 316 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.2E-9 | 263 | 317 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 1.8E-10 | 263 | 313 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 6.81E-9 | 267 | 311 | No hit | No description |
Pfam | PF00249 | 1.4E-8 | 267 | 309 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence Send to blast |
MDPIANQGWT SSDVEEACSL IARLNTNKIM YDDDDNNKKH NYIVNSLHAF FPSKTMKQVI 60 DLYVDLAMDM HMIQRREGTH VTGGSPQNIF TFCDPVNGNY ELPKEENGGS STHSVYPMGD 120 HANENFGVRE EETTIMDNNG LSFGCAMDDT RITVMGEAPL MADNNKMEVL ENNISIDQPI 180 VAPHQWGFLT DEEHSMGGLV NENIEVQEDG EMTMDVSGFS FHCILEDTRI RKTEEAPVMV 240 DKNKMVVLEN NSSNDRRVVA PHQRKFWTKE EHKSFLYGLE VYGRGDWKNI SKHFVTTKTP 300 VQVSSHAQKF FKRIEKKALS GTKRYSINDV RLHDNELLAA NNSSAPRQTL CFTSLNNDPS 360 FRLQAPTSSF AVMNNLAQCS PSIYNQQVGQ QPMCCEQQMM GSTEAVMGGV GNYVPDGQQG 420 SAYFYLGNV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | M8APA9 | 0.0 | M8APA9_TRIUA; Transcription factor MYB1R1 | ||||
STRING | MLOC_51337.2 | 0.0 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP842 | 30 | 133 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05790.1 | 1e-19 | MYB family protein |